io.github.cyanheads/openalex-mcp-server

---

Overview

Scholarly catalog data from OpenAlex — 270M+ works, 90M+ authors, 100K+ sources, plus institutions, topics, keywords, publishers, and funders. Search, filter, and aggregate across all eight entity types, resolve ambiguous names to canonical IDs, and walk the citation graph one hop at a time. Runs as a stdio process, a local Streamable HTTP server, or the public hosted endpoint above.

Tools

Tool	Description
openalex_search_entities	Search, filter, sort, or retrieve by ID across all 8 entity types
openalex_analyze_trends	Group-by aggregation for trend and distribution analysis
openalex_resolve_name	Resolve a name or an identifier (DOI, ORCID, ROR, PMID, ISSN, OpenAlex ID) to an OpenAlex ID
openalex_get_citation_graph	Walk the citation graph one hop from a seed work: cites, cited_by, or related_to
openalex_describe_fields	List valid filter, group_by, and select field names for an entity type

Prompts

Prompt	Description
openalex_literature_review	Guides a systematic literature search: formulate query, search, filter, analyze citation network, synthesize findings
openalex_research_landscape	Analyzes the research landscape for a topic: volume trends, top authors/institutions, open access rates, funding sources

Capability reference

openalex_search_entities _tool

• Retrieve a single entity by ID — OpenAlex ID, DOI, ORCID, ROR, PMID, ISSN, or PMCID (bare or URL form), or a keyword by its slug or keyword URL. id takes precedence: search parameters passed alongside it are dropped, and the response names which ones. A PMCID resolves nothing (OpenAlex indexes none) — use the work's PMID or DOI instead
• Keyword search (boolean operators, quoted phrases, wildcards, fuzzy match) plus exact and semantic search modes — semantic ranks at most 50 candidates at ~1 req/sec, and its meta.count reports that ceiling rather than a match total
• Rich filter syntax: AND across fields, OR within a field (|), NOT (!), ranges, comparisons; a comma inside a filter value is rejected (use |, or a .search filter for free text)
• select returns a curated per-entity-type default unless overridden, or ["*"] for the full record; invalid field names error with the valid set
• Cursor pagination for keyword and exact search, up to 100 results per page (default 25); semantic search walks its candidates with page (1-based) instead, and mixing either knob with the wrong search_mode is rejected before the upstream call
• sample (up to 100, single page only — neither cursor nor page applies) plus a deterministic seed for reproducible random sampling
• display_name is nullable for untitled records; every call reports OpenAlex daily-budget cost and remaining balance

---

openalex_analyze_trends _tool

• Group any supported field for trend, distribution, or comparative analysis; combine with filters to scope the population before aggregation
• Up to 200 groups per page (default). order: "count" (default) returns the top-N by count with no further pages; order: "key" enumerates all distinct values key-ascending with cursor pagination
• include_unknown (default false) adds a group for entities with no value for the grouped field
• Not every field is groupable — raw date fields, .search operators, and from_*/to_* range modifiers are rejected; check with openalex_describe_fields(entity_type, "group_by")
• Reports OpenAlex daily-budget cost and remaining balance — aggregation is priced far below paging the same entities

---

openalex_resolve_name _tool

• A name or partial name runs an autocomplete search: up to 10 matches with disambiguation hints (last institution, host organization, place, etc.)
• An identifier — OpenAlex ID, DOI, ORCID, ROR, PMID, ISSN, or keyword URL, bare or in URL form — resolves directly to the one record it addresses; no entity_type needed, since the identifier determines its own. A PMCID is recognized but resolves nothing — OpenAlex indexes none
• filters narrows autocomplete only; on an identifier lookup they're ignored and named in a notice
• Reports OpenAlex daily-budget cost and remaining balance

---

openalex_get_citation_graph _tool

• direction sets the edge: cites (works citing the seed), cited_by (the seed's own reference list), related_to (OpenAlex's algorithmic related works, ~8-30 typical, may be empty)
• seed_id accepts an OpenAlex ID, DOI, or PMID (PMCID recognized but resolves nothing); validated against a live lookup first, so a non-existent seed fails as NotFound rather than returning an empty graph
• Stacks with filters/sort/select to narrow the graph; filters cannot set cites/cited_by/related_to, nor an alias of one such as cited_works — those keys are reserved for direction
• Cursor pagination, up to 100 results per page (default 25)
• Reports OpenAlex daily-budget cost, covering both the seed-validation lookup and the graph page, plus remaining balance

---

openalex_describe_fields _tool

• Lists every valid field name for an entity type + context (filter, group_by, select) — the complete pool, never truncated
• group_by is the filter set minus raw date fields, .search/.search.exact operators, and from_*/to_* range modifiers, which OpenAlex rejects as aggregation keys
• Optional query reorders results by name similarity without dropping any field — a nested value's parent object stays reachable further down the list
• Backed by a generated field catalog — no live API calls

---

openalex_literature_review _prompt

• Arguments: topic required; scope (narrow / broad) optional, defaults to narrow
• Returns one user message walking a 6-step workflow: resolve entities, search literature, identify key papers, trace citations, analyze the landscape, synthesize findings
• scope changes the search step: narrow favors exact search with tight topic filters; broad adds semantic search across multiple related topic IDs

---

openalex_research_landscape _prompt

• Arguments: topic required
• Returns one user message walking a 7-step quantitative workflow: resolve the topic ID, volume trends, top contributors (institutions/countries/journals), open access rate, funding sources, most-cited works, emerging fronts
• The funding step groups by awards.funder_id (resolve names via openalex_resolve_name) or awards.funder_display_name for readable labels in a single hop

Features

Built on @cyanheads/mcp-ts-core: stdio and Streamable HTTP transports, pluggable auth (none / jwt / oauth), swappable storage (in-memory, filesystem, Supabase, Cloudflare KV/R2/D1), structured logging with optional OpenTelemetry tracing.

OpenAlex-specific:

• Typed API client with automatic ID normalization (DOI, ORCID, ROR, PMID, PMCID, ISSN, OpenAlex and PubMed/PubMed Central URLs); a PMCID normalizes but resolves nothing since OpenAlex indexes none
• Keyless by default — an optional API key raises rate and daily-budget limits, and an optional mailto identifies the caller to OpenAlex's polite pool
• HTTP status codes mapped to specific MCP error classes (400 → InvalidParams, 422 → ValidationError, 429 → RateLimited) with upstream messages surfaced
• Timeout-aware request retries and cancellation support via AbortSignal

Agent-friendly output:

• Provenance — every API-calling tool reports OpenAlex daily-budget cost, remaining balance, and reset time (budget.costUsd, remainingUsd, resetsInSeconds)
• Effective-query echo — search, trends, and citation-graph responses echo the criteria that actually ran, so an empty result is diagnosable without re-reading the request
• Discriminated output contracts — typed error reasons (entity_not_found, upstream_budget_exhausted, semantic_per_page_cap, reserved_filter_key, and more) each carrying an explicit recovery hint
• Response shaping — abstracts are reconstructed from OpenAlex's inverted-index encoding into plaintext, and display_name stays null for untitled or paratext records instead of being backfilled

Getting started

Public Hosted Instance

A public instance is available at https://openalex.caseyjhand.com/mcp — no installation required. Point any MCP client at it via Streamable HTTP:

{
  "mcpServers": {
    "openalex-mcp-server": {
      "type": "streamable-http",
      "url": "https://openalex.caseyjhand.com/mcp"
    }
  }
}

Self-Hosted / Local

Add the following to your MCP client configuration file.

{
  "mcpServers": {
    "openalex-mcp-server": {
      "type": "stdio",
      "command": "bunx",
      "args": ["@cyanheads/openalex-mcp-server@latest"],
      "env": {
        "MCP_TRANSPORT_TYPE": "stdio",
        "MCP_LOG_LEVEL": "info",
        "OPENALEX_API_KEY": "your-api-key"
      }
    }
  }
}

Or with npx (no Bun required):

{
  "mcpServers": {
    "openalex-mcp-server": {
      "type": "stdio",
      "command": "npx",
      "args": ["-y", "@cyanheads/openalex-mcp-server@latest"],
      "env": {
        "MCP_TRANSPORT_TYPE": "stdio",
        "MCP_LOG_LEVEL": "info",
        "OPENALEX_API_KEY": "your-api-key"
      }
    }
  }
}

Or with Docker:

{
  "mcpServers": {
    "openalex-mcp-server": {
      "type": "stdio",
      "command": "docker",
      "args": [
        "run", "-i", "--rm",
        "-e", "MCP_TRANSPORT_TYPE=stdio",
        "-e", "OPENALEX_API_KEY=your-api-key",
        "ghcr.io/cyanheads/openalex-mcp-server:latest"
      ]
    }
  }
}

For Streamable HTTP, set the transport and start the server:

MCP_TRANSPORT_TYPE=http MCP_HTTP_PORT=3010 OPENALEX_API_KEY=... bun run start:http
# Server listens at http://localhost:3010/mcp

OPENALEX_API_KEY is optional — set it to a free OpenAlex account key for keyed rate limits and budget under OpenAlex's usage-based pricing, or omit it for anonymous access. Set OPENALEX_MAILTO to an email if you want to identify yourself to OpenAlex (the polite pool).

Prerequisites

• Bun v1.4.0 or higher (or Node.js v24+).
• Optional: an OpenAlex account API key for keyed rate limits and budget — omit for anonymous access.

Installation

1. Clone the repository:

git clone https://github.com/cyanheads/openalex-mcp-server.git

2. Navigate into the directory:

cd openalex-mcp-server

3. Install dependencies:

bun install

4. Configure environment:

cp .env.example .env
# edit .env and set required vars

Configuration

Variable	Description	Default
MCP_TRANSPORT_TYPE	Transport: stdio or http.	stdio
MCP_HTTP_PORT	Port for HTTP server.	3010
MCP_SESSION_MODE	HTTP session mode: stateless, stateful, or auto (resolves to stateful). The server declares stateless in code; an explicit value overrides it.	stateless
MCP_AUTH_MODE	Auth mode: none, jwt, or oauth.	none
MCP_ALLOWED_ORIGINS	Comma-separated allow-list of browser Origin headers for HTTP transport. Unset = loopback-only; set to * to disable.	loopback only
MCP_LOG_LEVEL	Log level (RFC 5424).	debug
LOGS_DIR	Directory for log files (Node.js only).	<project-root>/logs
STORAGE_PROVIDER_TYPE	Storage backend.	in-memory
OPENALEX_API_KEY	OpenAlex account API key, sent upstream as api_key= (free from openalex.org/settings/api). Without it, anonymous rate limits apply.	—
OPENALEX_MAILTO	Email sent upstream as mailto= to identify yourself to OpenAlex (the "polite pool"); a courtesy identifier, separate from the API key.	—
OPENALEX_BASE_URL	OpenAlex API base URL.	https://api.openalex.org
OTEL_ENABLED	Enable OpenTelemetry instrumentation (spans, metrics, completion logs).	false

See .env.example for the full list of optional overrides.

Running the server

Local development

• Build and run:

  # One-time build
  bun run rebuild
  
  # Run the built server
  bun run start:stdio
  # or
  bun run start:http
  

• Run checks and tests:

  bun run devcheck   # Lints, formats, type-checks
  bun run test       # Runs the test suite
  

Docker

docker build -t openalex-mcp-server .
docker run --rm -e OPENALEX_API_KEY=your-key -p 3010:3010 openalex-mcp-server

The Dockerfile defaults to HTTP transport, stateless session mode, and logs to /var/log/openalex-mcp-server. OpenTelemetry peer dependencies are installed by default — build with --build-arg OTEL_ENABLED=false to omit them.

Project structure

Directory	Purpose
src/index.ts	createApp() entry point — registers tools and prompts.
src/config/	Server-specific environment variable parsing and validation with Zod.
src/mcp-server/tools/definitions/	Tool definitions (*.tool.ts).
src/mcp-server/prompts/definitions/	Prompt definitions (*.prompt.ts).
src/services/openalex/	OpenAlex API client, field catalog, and domain types.
tests/	Unit and integration tests, mirroring the src/ structure.

Development guide

See CLAUDE.md for development guidelines and architectural rules. The short version:

• Handlers throw, framework catches — no try/catch in tool logic
• Use ctx.log for logging, ctx.state for storage
• Wrap OpenAlex responses: validate the raw payload → normalize to a domain type → return the output schema; never fabricate missing fields
• Always resolve names to IDs via openalex_resolve_name before filtering by entity

Contributing

Issues are welcome. Run checks before submitting:

bun run devcheck
bun run test

License

Apache-2.0 — see LICENSE for details.